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Dr. Roberto Olivares Hernández Departamento de Procesos y Tecnología

Resumen Curricular

  • Profesor Asociado D  Tiempo Completo, UAM-C (2016- actual)
  • Profesor Visitante Titular B, UAM-C (2013-2015)
  • Postdoctorado, CINVESTAV-Irapuato (2011-2012)
  • Doctorado en Biociencias, Chalmers University of Technology (2012)
  • M. en C. Ingeniería Química, UAM-I  (2004)
  • Ingeniero Químico, UAM-I (2001)

Área de interés/experiencia en investigación

  • Matemáticas Aplicadas en Ingeniería de Bioprocesos y Sistemas Biológicos
  • Modelado matemático de redes metabólicas.
  • Ingeniería Metabólica. Biología de Sistemas. Biología Sintética.
  • Análisis de datos de transcriptómica, proteómica y fluxómica.
  • Biotencología industrial

Publicaciones en Revistas

  • Olivares-Hernández R., Bordel S. and Nielsen J., (2011), “Codon usage variability in the correlation between proteome and transcriptome fold changes”. BMC Systems Biology,5(1)
  • Olivares-Hernández R., Usaite R. and Nielsen J., (2010), “Integrative analysis using proteome and transcriptome data from yeast to unravel regulatory patterns at posttranscriptional level”. Biotechnology and Bioengineering, 107: 865–875.
  • Marija Cvijovic, Roberto Olivares-Hernández, Rasmus Ågren, Wanwipa Vongsangnak, Intawat Nookaew, Niklas Dahr, Jens Nielsen, (2010), “BioMet Toolbox: Toolbox for systematic analysis of metabolism”. Nucleic Acid Research,38:W144-149.
  • José Manuel Otero, Wanwipa Vongsangak, A. Asadollahi Mohammad, Roberto Olivares-Hernandez, Jérôme Maury, Laurent Farinelli, Loic Barlocher, Michel Schalk, Anthony Clark, Jens Nielsen, (2010), “Whole genome sequencing of Saccharomyces cerevisiae: from genotype to phenotype for improved metabolic engineering applications” BMC Genomics, 11:723.
  •  R. Olivares-Hernández, Z. Yang, I. Kouskoumvekaki, H. Sunner, J. Frisvad, J. Nielsen, L. Olsson, and G. Panagiotou,(2010) “Combining Substrate Specificity Analysis with Support Vector Classifiers Reveals Feruloyl Esterase as a Phylogenetically Informative Protein Group”. PLoS one Evolutionary Biology, 5(9): e12781.
  • S.Meijer, J.Otero, R.Olivares, M.R. Andersen, L.Olsson, J.Nielsen, (2009) “Overexpression of isocitrate lyase—glyoxylate bypass influence on metabolism in Aspergillus niger”, Metabolic Engineering, 11:107-116.
  • Debra Rossouw, Roberto Olivares-Hernández, Jens Nielsen, Florian F Bauer, (2009), “A comparative ‘omics’ approach to model changes in wine yeast metabolism during fermentation”. Applied and Environmental Microbiology,75(20):6600-6612.

 

 

Memorias de Congreso

  • Biotechnology Summit 2014. Poster 1: “Genome annotation and reconstruction of the metabolic model of the fungus Leucoagaricus gongylophorus”. Poster 2: “Pharmacokinetics of IgY in rabbits”. Octubre 8-10, 2014. Huatulco, México.
  • XV Congreso Nacional de Biotecnología y Bioingeniería. Poster: “Integrative dynamic analysis of tryptophan production in Escherichia coli”. Junio 23-28, 2013. Cancún, México.
  • 9th Swedish Bioinformatics Workshop,2009. Poster:  “Posttranscriptional regulation in yeast; a sequence analysis approach” . Roberto Olivares and Jens Nielsen. Umeå, Sweden
  • 27th International Specialized Symposium on Yeasts,2009. Poster: “Comparing protein and mRNA expression level on a genome scale: posttranscriptional regulation in yeast Saccharomyces cerevisiae. Roberto Olivares, Renata Usaite and Jens Nielsen. Paris, France
  • International Conference in Yeast Systems Biology 2008. Poster:  “Understanding translation regulation in yeast using correlations between mRNA levels and protein levels” . Roberto Olivares, Renata Usaite and Jens Nielsen. Göteborg, Suecia
  • Computational Cell Biology Meeting, 2008. Poster: “Comparing protein and mRNA expression level on a genome scale: posttranscriptional regulation in yeast Saccharomyces cerevisiae. Roberto Olivares, Renata Usaite and Jens Nielsen.Hinxton, United Kingdom
  • International Conference in Yeast Systems Biology, 2007.Poster: “Comparing protein and mRNA expression level on a genome scale: posttranscriptional regulation in yeast Saccharomyces cerevisiae” Roberto Olivares, Renata Usaite, Kiran Patil and Jens Nielsen. Long beach, California
  • ISSY25, Systems Biology of Yeast-From Models to Applications, 2006.Poster: “Incorporating Protein Biosynthesis into the Saccharomyces cerevisiae Genome-scale Metabolic Model”,  Roberto Olivares, Michael C. Jewett, Jens Nielsen
  • Presentación Oral: “Incorporating Protein Biosynthesis into the Saccharomyces cerevisiae Genome-scale Metabolic Model”,  Roberto Olivares, Michael C. Jewett, Jens Nielsen. Helsinki,Finlandia
  • Danish Conference in Molecular Biology and Biotechnology, 2006. Poster: “Incorporating Protein Biosynthesis into the Saccharomyces cerevisiae Genome-scale Metabolic Model”,  Roberto Olivares, Michael C. Jewett, Jens Nielsen. Vejle, Dinamarca
  • IX Congreso de la division de Dinamica de Fluidos de la Sociedad Mexicana de Fisica,2003. Poster: “Transferencia de calor entre un fluido y un medio poroso”. Instituto Mexicano del Petróleo, Ciudad de México, México.
  • XXIV Encuentro Nacional de La Academia Mexicana de Investigación y Docencia en Ingeniería Química AMIDIQ,2003. Exposición Oral: “Transporte de calor y masa entre un fluido y un medio poroso”. Ixtapa, Guerrero, México.

Capítulos en Libros

  • Nookaew I., Olivares-Hernández R., Bhumiratana S, Nielsen J., (2011), “Genome-scale metabolic models of Saccharomyces cerevisiae”. Methods Mol. Biol, 759:445-63.
  • G. Panagiotou, E. Topakas, R. Olivares, P. Christakopoulos, L. Olsson, (2011), “Nutraceutical Compounds: Feruloyl Esterases as Biosynthetic Tools”. Encyclopedia of Biotechnology in Agriculture and Food, Eds. Heldman and Bridges. (ISBN:0-8493-5027-1)

Libros

Formación de Recursos Humanos

Otra Información de Relevancia Académica